source: fedd/deter/topdl.py @ 59c56fa

#!/usr/local/bin/python

import re
import xml.parsers.expat
from xml.sax.saxutils import escape
from base64 import b64encode
from string import join

try:
    from fedid import fedid as fedid_class
except ImportError:
    class fedid_class:
        '''
        Dummy class to allow most of the topdl function when m2crypto and asn1
        are not around
        '''
        def __init__(self, hexstr=None):
            if hexstr is not None: self.data = hexstr
            else: self.data = "default data"

        def get_bits(self):
            return self.data

class base:
    @staticmethod
    def init_class(c, arg):
        if isinstance(arg, dict):
            try:
                return c(**arg)
            except:
                print "%s" % arg
                raise
        elif isinstance(arg, c):
            return arg
        else:
            return None

    @staticmethod
    def make_list(a):
        if isinstance(a, basestring) or isinstance(a, dict): return [ a ]
        elif getattr(a, '__iter__', None): return a
        else: return [ a ]

    @staticmethod
    def init_string(s):
        """
        Force a string coercion for everything but a None.
        """
        if s is not None: return "%s" % s
        else: return None

    def remove_attribute(self, key):
        to_del = None
        attrs = getattr(self, 'attribute', [])
        for i, a in enumerate(attrs):
            if a.attribute == key:
                to_del = i
                break
        
        if to_del: del attrs[i]

    def get_attribute(self, key):
        rv = None
        attrs = getattr(self, 'attribute', None)
        if attrs:
            for a in attrs:
                if a.attribute == key:
                    rv = a.value
                    break
        return rv

    def set_attribute(self, key, value):
        attrs = getattr(self, 'attribute', None)
        if attrs is None:
            return
        for a in attrs:
            if a.attribute == key: 
                a.value = value
                break
        else:
            attrs.append(Attribute(key, value))

class ConsistencyError(RuntimeError): pass
class NamespaceError(RuntimeError): pass

class Attribute(base):
    def __init__(self, attribute, value):
        self.attribute = self.init_string(attribute)
        self.value = self.init_string(value)

    def clone(self):
        return Attribute(attribute=self.attribute, value=self.value)

    def to_dict(self):
        return { 'attribute': self.attribute, 'value': self.value }
    def to_xml(self):
        return "<attribute>%s</attribute><value>%s</value>" % \
                (escape(self.attribute), escape(self.value))

class Capacity(base):
    def __init__(self, rate, kind):
        self.rate = float(rate)
        self.kind = self.init_string(kind)

    def clone(self):
        return Capacity(rate=self.rate, kind=self.kind)

    def to_dict(self):
        return { 'rate': float(self.rate), 'kind': self.kind }

    def to_xml(self):
        return "<rate>%f</rate><kind>%s</kind>" % (self.rate, self.kind)

class Latency(base):
    def __init__(self, time, kind):
        self.time = float(time)
        self.kind = self.init_string(kind)

    def clone(self):
        return Latency(time=self.time, kind=self.kind)

    def to_dict(self):
        return { 'time': float(self.time), 'kind': self.kind }

    def to_xml(self):
        return "<time>%f</time><kind>%s</kind>" % (self.time, self.kind)

class ServiceParam(base):
    def __init__(self, name, type):
        self.name = self.init_string(name)
        self.type = self.init_string(type)

    def clone(self):
        return ServiceParam(self.name. self.type)

    def to_dict(self):
        return { 'name': name, 'type': type }

    def to_xml(self):
        return "<name>%s</name><type>%s</type>" % (self.name, self.type)

class Service(base):
    def __init__(self, name, importer=[], param=[], description=None, 
            status=None):
        self.name = self.init_string(name)
        self.importer = [self.init_string(i) \
                for i in self.make_list(importer)]
        self.param = [ self.init_class(ServiceParam, p) \
                for p in self.make_list(param) ]
        self.description = self.init_string(description)
        self.status = self.init_string(status)

    def clone(self):
        return Service(
                name=self.name, 
                importer=[ i for i in self.importer], 
                param=[p.clone() for p in self.param], 
                description=self.description,
                status=self.status)

    def to_dict(self):
        rv = { }
        if self.name is not None:
            rv['name'] = self.name
        if self.importer:
            rv['importer'] = [ i for i in self.importer ]
        if self.param:
            rv['param'] = [ p.to_dict() for p in self.param ]
        if self.description is not None:
            rv['description'] = self.description
        if self.status is not None:
            rv['status'] = self.status
        return rv

    def to_xml(self):
        rv = '' 
        if self.name is not None:
            rv += '<name>%s</name>' % self.name
        if self.importer:
            rv += join(['<importer>%s</importer>' % i \
                    for i in self.importer],'')
        if self.param:
            rv += join(['<param>%s</param>' % p.to_xml() \
                    for p in self.param], '')
        if self.description is not None:
            rv += '<description>%s</description>' % self.description
        if self.status is not None:
            rv += '<status>%s</status>' % self.status
        return rv

class Substrate(base):
    def __init__(self, name, capacity=None, latency=None, attribute=[],
            localname=[], status=None, service=[], operation=[]):
        self.name = self.init_string(name)
        self.capacity = self.init_class(Capacity, capacity)
        self.latency = self.init_class(Latency, latency)
        self.attribute = [ self.init_class(Attribute, a) \
                for a in self.make_list(attribute) ]
        self.localname = [ self.init_string(ln)\
                for ln in self.make_list(localname) ]
        self.status = self.init_string(status)
        self.service = [ self.init_class(Service, s) \
                for s in self.make_list(service)]
        self.operation = [self.init_string(op) \
                for op in self.make_list(operation)]
        self.interfaces = [ ]

    def clone(self):
        if self.capacity: c = self.capacity.clone()
        else: c = None

        if self.latency: l = self.latency.clone()
        else: l = None

        return Substrate(name=self.name,
                capacity=c,
                latency=l,
                attribute = [a.clone() for a in self.attribute],
                localname = [ ln for ln in self.localname],
                status = self.status,
                service = [ s.clone() for s in self.service],
                operation=[ op for op in self.operation])

    def to_dict(self):
        rv = { 'name': self.name }
        if self.capacity:
            rv['capacity'] = self.capacity.to_dict()
        if self.latency:
            rv['latency'] = self.latency.to_dict()
        if self.attribute:
            rv['attribute'] = [ a.to_dict() for a in self.attribute ]
        if self.localname:
            rv['localname'] = [ ln for ln in self.localname ]
        if self.status:
            rv['status'] = self.status
        if self.service:
            rv['service'] = [s.to_dict() for s in self.service]
        if self.operation:
            rv['operation'] = [op for op in self.operation]
        return rv

    def to_xml(self):
        rv = "<name>%s</name>" % escape(self.name)
        if self.capacity is not None:
            rv += "<capacity>%s</capacity>" % self.capacity.to_xml()
        if self.latency is not None:
            rv += "<latency>%s</latency>" % self.latency.to_xml()
        
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        if self.localname:
            rv += join(['<localname>%s</localname>' % ln \
                    for ln in self.localname], '')
        if self.status is not None:
            rv += '<status>%s</status>' % self.status
        if self.service:
            rv += join(['<service>%s</service' % s.to_xml() \
                    for s in self.service], '')
        if self.operation:
            rv += join(['<operation>%s</operation>' % op \
                    for op in self.operation], '')
        return rv

    def __getstate__(self):
        d = self.__dict__.copy()
        del d['interfaces']
        return d

    def __setstate__(self, d):
        # Import everything from the pickle dict (except what we excluded in
        # __getstate__)
        self.__dict__.update(d)
        self.interfaces = []

class CPU(base):
    def __init__(self, type, attribute=[]):
        self.type = self.init_string(type)
        self.attribute = [ self.init_class(Attribute, a) for a in \
                self.make_list(attribute) ]

    def clone(self):
        return CPU(type=self.type,
                attribute = [a.clone() for a in self.attribute])

    def to_dict(self):
        rv = { 'type': self.type}
        if self.attribute:
            rv['attribute'] = [ a.to_dict() for a in self.attribute ]
        return rv

    def to_xml(self):
        rv = "<type>%s</type>" % escape(self.type)
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        return rv


class Storage(base):
    def __init__(self, amount, persistence, attribute=[]):
        self.amount = float(amount)
        self.persistence = self.init_string(persistence)
        self.attribute = [ self.init_class(Attribute, a) \
                for a in self.make_list(attribute) ]

    def clone(self):
        return Storage(amount=self.amount, persistence=self.persistence, 
                attribute = [a.clone() for a in self.attribute])

    def to_dict(self):
        rv = { 'amount': float(self.amount), 'persistence': self.persistence }
        if self.attribute:
            rv['attribute'] = [ a.to_dict() for a in self.attribute ]
        return rv

    def to_xml(self):
        rv = "<amount>%f</amount><persistence>%s</persistence>" % \
                (self.amount, escape(self.persistence))
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        return rv


class OperatingSystem(base):
    def __init__(self, name=None, version=None, distribution=None,
            distributionversion=None, attribute=[]):
        self.name = self.init_string(name)
        self.version = self.init_string(version)
        self.distribution = self.init_string(distribution)
        self.distributionversion = self.init_string(distributionversion)
        self.attribute = [ self.init_class(Attribute, a) \
                for a in self.make_list(attribute) ]

    def clone(self):
        return OperatingSystem(name=self.name,
                version=self.version,
                distribution=self.distribution,
                distributionversion=self.distributionversion,
                attribute = [ a.clone() for a in self.attribute])

    def to_dict(self):
        rv = { }
        if self.name: rv['name'] = self.name
        if self.version: rv['version'] = self.version
        if self.distribution: rv['distribution'] = self.distribution
        if self.distributionversion: 
            rv['distributionversion'] = self.distributionversion
        if self.attribute:
            rv['attribute'] = [ a.to_dict() for a in self.attribute ]
        return rv

    def to_xml(self):
        rv = ""
        if self.name: rv += "<name>%s</name>" % escape(self.name)
        if self.version: rv += "<version>%s</version>" % escape(self.version)
        if self.distribution: 
            rv += "<distribution>%s</distribution>" % escape(self.distribution)
        if self.distributionversion: 
            rv += "<distributionversion>%s</distributionversion>" % \
                    escape(self.distributionversion)
        
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        return rv


class Software(base):
    def __init__(self, location, install=None, attribute=[]):
        self.location = self.init_string(location)
        self.install = self.init_string(install)
        self.attribute = [ self.init_class(Attribute, a)\
                for a in self.make_list(attribute) ]

    def clone(self):
        return Software(location=self.location, install=self.install, 
                attribute=[a.clone() for a in self.attribute])

    def to_dict(self):
        rv = { 'location': self.location }
        if self.install: rv['install'] = self.install
        if self.attribute:
            rv['attribute'] = [ a.to_dict() for a in self.attribute ]
        return rv

    def to_xml(self):
        rv = "<location>%s</location>" % escape(self.location)
        if self.install: rv += "<install>%s</install>" % self.install
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        return rv


class Interface(base):
    def __init__(self, substrate, name=None, capacity=None, latency=None,
            attribute=[], element=None):
        self.name = self.init_string(name)

        self.substrate = self.make_list(substrate)
        self.capacity = self.init_class(Capacity, capacity)
        self.latency = self.init_class(Latency, latency)
        self.attribute = [ self.init_class(Attribute, a) \
                for a in self.make_list(attribute) ]
        self.element = element 
        self.subs = [ ]

    def clone(self):
        if self.capacity: c = self.capacity.clone()
        else: c = None

        if self.latency: l = self.latency.clone()
        else: l = None

        return Interface(substrate=[s for s in self.substrate], name=self.name,
                capacity=c, latency=l,
                attribute = [ a.clone() for a in self.attribute])

    def to_dict(self):
        rv = { 'substrate': self.substrate, 'name': self.name }
        if self.capacity:
            rv['capacity'] = self.capacity.to_dict()
        if self.latency:
            rv['latency'] = self.latency.to_dict()
        if self.attribute:
            rv['attribute'] = [ a.to_dict() for a in self.attribute ]
        return rv

    def to_xml(self):
        rv = join(["<substrate>%s</substrate>" % escape(s) \
                for s in self.substrate], "")
        rv += "<name>%s</name>" % self.name
        if self.capacity:
            rv += "<capacity>%s</capacity>" % self.capacity.to_xml()
        if self.latency:
            rv += "<latency>%s</latency>" % self.latency.to_xml()
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        return rv

    def __getstate__(self):
        d = self.__dict__.copy()
        del d['subs']
        return d

    def __setstate__(self, d):
        # Import everything from the pickle dict (except what we excluded in
        # __getstate__)
        self.__dict__.update(d)
        self.subs = []


class ID(base):
    def __init__(self, fedid=None, uuid=None, uri=None, localname=None,
            kerberosUsername=None):
        self.fedid=fedid_class(hexstr="%s" % fedid)
        self.uuid = self.init_string(uuid)
        self.uri = self.init_string(uri)
        self.localname =self.init_string( localname)
        self.kerberosUsername = self.init_string(kerberosUsername)

    def clone(self):
        return ID(self.fedid, self.uuid, self.uri, self.localname,
                self.kerberosUsername)

    def to_dict(self):
        rv = { }
        if self.fedid: rv['fedid'] = self.fedid
        if self.uuid: rv['uuid'] = self.uuid
        if self.uri: rv['uri'] = self.uri
        if self.localname: rv['localname'] = self.localname
        if self.kerberosUsername: rv['kerberosUsername'] = self.kerberosUsername
        return rv

    def to_xml(self):
        if self.uuid: rv = "<uuid>%s</uuid>" % b64encode(self.uuid)
        elif self.fedid: rv = "<fedid>%s</fedid>" % \
                b64encode(self.fedid.get_bits())
        elif self.uri: rv = "<uri>%s</uri>" % escape(self.uri)
        elif self.localname: 
            rv = "<localname>%s</localname>" % escape(self.localname)
        elif self.kerberosUsername: 
            rv = "<kerberosUsername>%s</kerberosUsername>" % \
                    escape(self.kerberosUsername)
        return rv

class Computer(base):
    def __init__(self, name, cpu=[], os=[], software=[], storage=[],
            interface=[], attribute=[], localname=[], status=None, service=[],
            operation=[]):
        def assign_element(i):
            i.element = self

        self.name = self.init_string(name)
        self.cpu = [ self.init_class(CPU, c)  for c in self.make_list(cpu) ]
        self.os = [ self.init_class(OperatingSystem, c) \
                for c in self.make_list(os) ]
        self.software = [ self.init_class(Software, c) \
                for c in self.make_list(software) ]
        self.storage = [ self.init_class(Storage, c) \
                for c in self.make_list(storage) ]
        self.interface = [ self.init_class(Interface, c) \
                for c in self.make_list(interface) ]
        self.attribute = [ self.init_class(Attribute, a) \
                for a in self.make_list(attribute) ]
        self.localname = [ self.init_string(ln)\
                for ln in self.make_list(localname) ]
        self.status = self.init_string(status)
        self.service = [ self.init_class(Service, s) \
                for s in self.make_list(service)]
        self.operation = [self.init_string(op) \
                for op in self.make_list(operation)]
        map(assign_element, self.interface)

    def clone(self):
        # Copy the list of names
        return Computer(name=self.name,
                cpu=[x.clone() for x in self.cpu],
                os=[x.clone() for x in self.os],
                software=[x.clone() for x in self.software],
                storage=[x.clone() for x in self.storage],
                interface=[x.clone() for x in self.interface],
                attribute=[x.clone() for x in self.attribute],
                localname =[ ln for ln in self.localname],
                status = self.status,
                service = [s.clone() for s in self.service],
                operation = [op for op in self.operation])

    def to_dict(self):
        rv = { }
        if self.name:
            rv['name'] = self.name
        if self.cpu:
            rv['cpu'] = [ c.to_dict() for  c in self.cpu ]
        if self.os:
            rv['os'] = [ o.to_dict() for o in self.os ]
        if self.software:
            rv['software'] = [ s.to_dict() for s in self.software ]
        if self.storage:
            rv['storage'] = [ s.to_dict() for s in self.storage ]
        if self.interface:
            rv['interface'] = [ i.to_dict() for i in self.interface ]
        if self.attribute:
            rv['attribute'] = [ i.to_dict() for i in self.attribute ]
        if self.localname:
            rv['localname'] = [ ln for ln in self.localname ]
        if self.status:
            rv['status'] = self.status
        if self.service:
            rv['service'] = [s.to_dict() for s in self.service]
        if self.operation:
            rv['operation'] = [op for op in self.operation]
        return { 'computer': rv }

    def to_xml(self):
        rv = "<name>%s</name>" % escape(self.name)
        if self.cpu:
            rv += join(["<cpu>%s</cpu>" % c.to_xml() for c in self.cpu], "")
        if self.os:
            rv += join(["<os>%s</os>" % o.to_xml() for o in self.os], "")
        if self.software:
            rv += join(["<software>%s</software>" % s.to_xml() \
                    for s in self.software], "")
        if self.storage:
            rv += join(["<storage>%s</storage>" % s.to_xml() \
                    for s in self.storage], "")
        if self.interface:
            rv += join(["<interface>%s</interface>" % i.to_xml() 
                for i in self.interface], "")
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        if self.localname:
            rv += join(['<localname>%s</localname>' % ln \
                    for ln in self.localname], '')
        if self.status is not None:
            rv += '<status>%s</status>' % self.status
        if self.service:
            rv += join(['<service>%s</service' % s.to_xml() \
                    for s in self.service], '')
        if self.operation:
            rv += join(['<operation>%s</operation>' % op \
                    for op in self.operation], '')
        return "<computer>%s</computer>" % rv



class Testbed(base):
    def __init__(self, uri, type, interface=[], attribute=[], localname=[],
            status=None, service=[], operation=[]):
        self.uri = self.init_string(uri)
        self.type = self.init_string(type)
        self.interface = [ self.init_class(Interface, c) \
                for c in self.make_list(interface) ]
        self.attribute = [ self.init_class(Attribute, c) \
                for c in self.make_list(attribute) ]
        self.localname = [ self.init_string(ln)\
                for ln in self.make_list(localname) ]
        self.status = self.init_string(status)
        self.service = [ self.init_class(Service, s) \
                for s in self.make_list(service)]
        self.operation = [self.init_string(op) \
                for op in self.make_list(operation)]

    def clone(self):
        return Testbed(self.uri, self.type,
                interface=[i.clone() for i in self.interface],
                attribute=[a.clone() for a in self.attribute],
                localname = [ ln for ln in self.localname ],
                status=self.status,
                service=[s.clone() for s in self.service ],
                operation = [ op for op in self.operation ])

    def to_dict(self):
        rv = { }
        if self.uri: rv['uri'] = self.uri
        if self.type: rv['type'] = self.type
        if self.interface:
            rv['interface'] = [ i.to_dict() for i in self.interface]
        if self.attribute:
            rv['attribute'] = [ a.to_dict() for a in self.attribute]
        if self.localname:
            rv['localname'] = [ ln for ln in self.localname ]
        if self.status:
            rv['status'] = self.status
        if self.service:
            rv['service'] = [s.to_dict() for s in self.service]
        if self.operation:
            rv['operation'] = [op for op in self.operation]
        return { 'testbed': rv }

    def to_xml(self):
        rv = "<uri>%s</uri><type>%s</type>" % \
                (escape(self.uri), escape(self.type))
        if self.interface:
            rv += join(["<interface>%s</interface>" % i.to_xml() 
                for i in self.interface], "")
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        if self.localname:
            rv += join(['<localname>%s</localname>' % ln \
                    for ln in self.localname], '')
        if self.status is not None:
            rv += '<status>%s</status>' % self.status
        if self.service:
            rv += join(['<service>%s</service' % s.to_xml() \
                    for s in self.service], '')
        if self.operation:
            rv += join(['<operation>%s</operation>' % op \
                    for op in self.operation], '')
        return "<testbed>%s</testbed>" % rv

        

class Segment(base):
    def __init__(self, id, type, uri, interface=[], attribute=[]):
        self.id = self.init_class(ID, id)
        self.type = self.init_string(type)
        self.uri = self.init_string(uri)
        self.interface = [ self.init_class(Interface, c) \
                for c in self.make_list(interface) ]
        self.attribute = [ self.init_class(Attribute, c) \
                for c in self.make_list(attribute) ]

    def clone(self):
        return Segment(self.id.clone(), self.type, self.uri, 
                interface=[i.clone() for i in self.interface], 
                attribute=[a.clone() for a in self.attribute])

    def to_dict(self):
        rv = { }
        if self.id: rv['id'] = self.id.to_dict()
        if self.type: rv['type'] = self.type
        if self.uri: rv['uri'] = self.uri
        if self.interface:
            rv['interface'] = [ i.to_dict() for i in self.interface ]
        if self.attribute:
            rv['attribute'] = [ a.to_dict() for a in self.attribute ]
        return { 'segment': rv }

    def to_xml(self):
        rv = "<id>%s</id><uri>%s</uri><type>%s</type>" % \
                (self.id.to_xml(), escape(self.uri), escape(self.type))
        if self.interface:
            rv += join(["<interface>%s</interface>" % i.to_xml() 
                for i in self.interface], "")
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        return "<segment>%s</segment>" % rv

class Other(base):
    def __init__(self, interface=[], attribute=[]):
        self.interface = [ self.init_class(Interface, c) \
                for c in self.make_list(interface) ]
        self.attribute = [ self.init_class(Attribute, c) \
                for c in self.make_list(attribute) ]

    def clone(self):
        return Other(interface=[i.clone() for i in self.interface], 
                attribute=[a.clone() for a in attribute])

    def to_dict(self):
        rv = {}
        if self.interface:
            rv['interface'] = [ i.to_dict() for i in self.interface ]
        if self.attribute:
            rv['attribute'] = [ a.to_dict() for a in self.attribute ]
        return {'other': rv }

    def to_xml(self):
        rv = ""
        if self.interface:
            rv += join(["<interface>%s</interface>" % i.to_xml() 
                for i in self.interface], "")
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        return "<other>%s</other>" % rv

class Topology(base):
    version = "1.0"
    @staticmethod
    def init_element(e):
        """
        e should be of the form { typename: args } where args is a dict full of
        the right parameters to initialize the element.  e should have only one
        key, but we walk e's keys in an arbitrary order and instantiate the
        first key we know how to.
        """
        classmap = {
                'computer': Computer,
                'testbed': Testbed,
                'segment': Segment,
                'other': Other,
            }

        if isinstance(e, dict):
            for k in e.keys():
                cl = classmap.get(k, None)
                if cl: return cl(**e[k])
        else:
            return e

    def __init__(self, substrates=[], elements=[], attribute=[], 
            version=None):

        if version is None: self.version = Topology.version
        else: self.version = version

        self.substrates = [ self.init_class(Substrate, s) \
                for s in self.make_list(substrates) ]
        self.elements = [ self.init_element(e) \
                for e in self.make_list(elements) ]
        #Weed out unknown elements
        self.elements = [ e for e in self.elements if e is not None ]
        self.attribute = [ self.init_class(Attribute, c) \
                for c in self.make_list(attribute) ]
        self.incorporate_elements()

    @staticmethod
    def name_element_interfaces(e):
        names = set([i.name for i in e.interface if i.name])
        inum = 0
        for i in [ i for i in e.interface if not i.name]:
            while inum < 1000:
                n = "inf%03d" % inum
                inum += 1
                if n not in names:
                    i.name = n
                    break
            else:
                raise NamespaceError("Cannot make new interface name")



    def name_interfaces(self):
        """
        For any interface without a name attribute, assign a unique one within
        its element.
        """

        for e in self.elements:
            self.name_element_interfaces(e)


    def incorporate_elements(self):

        # Could to this init in one gulp, but we want to look for duplicate
        # substrate names
        substrate_map = { }
        for s in self.substrates:
            s.interfaces = [ ]
            if not substrate_map.has_key(s.name):
                substrate_map[s.name] = s
            else:
                raise ConsistencyError("Duplicate substrate name %s" % s.name)

        for e in self.elements:
            self.name_element_interfaces(e)
            for i in e.interface:
                i.element = e
                i.subs = [ ]
                for sn in i.substrate:
                    # NB, interfaces have substrate names in their substrate
                    # attribute.
                    if substrate_map.has_key(sn):
                        sub = substrate_map[sn]
                        i.subs.append(sub)
                        sub.interfaces.append(i)
                    else:
                        raise ConsistencyError("No such substrate for %s" % sn)

    def clone(self):
        return Topology(substrates=[s.clone() for s in self.substrates], 
                elements=[e.clone() for e in self.elements],
                attribute=[a.clone() for a in self.attribute],
                version=self.version)


    def make_indices(self):
        sub_index = dict([(s.name, s) for s in self.substrates])
        elem_index = dict([(n, e) for e in self.elements for n in e.name])

    def to_dict(self):
        rv = { }
        rv['version'] = self.version
        if self.substrates:
            rv['substrates'] = [ s.to_dict() for s in self.substrates ]
        if self.elements:
            rv['elements'] = [ s.to_dict() for s in self.elements ]
        if self.attribute:
            rv['attribute'] = [ s.to_dict() for s in self.attribute]
        return rv

    def to_xml(self):
        rv = "<version>%s</version>" % escape(self.version)
        if self.substrates:
            rv += join(["<substrates>%s</substrates>" % s.to_xml() \
                    for s in self.substrates], "")
        if self.elements:
            rv += join(["<elements>%s</elements>" % e.to_xml() \
                    for e in self.elements], "")
        if self.attribute:
            rv += join(["<attribute>%s</attribute>" % a.to_xml() \
                    for a in self.attribute], "")
        return rv

    def __setstate__(self, d):
        # Import everything from the pickle dict and call incorporate to
        # connect them.
        self.__dict__.update(d)
        self.incorporate_elements()


def topology_from_xml(string=None, file=None, filename=None, top="topology"):
    class parser:
        def __init__(self, top):
            self.stack = [ ]
            self.chars = ""
            self.key = ""
            self.have_chars = False
            self.current = { }
            self.in_cdata = False
            self.in_top = False
            self.top = top
        
        def start_element(self, name, attrs):
            self.chars = ""
            self.have_chars = False
            self.key = str(name)

            if name == self.top:
                self.in_top = True

            if self.in_top:
                self.stack.append((self.current, self.key))
                self.current = { }

        def end_element(self, name):
            if self.in_top:
                if self.have_chars:
                    self.chars = self.chars.strip()
                    if len(self.chars) >0:
                        addit = self.chars
                    else:
                        addit = self.current
                else:
                    addit = self.current

                parent, key = self.stack.pop()
                if parent.has_key(key):
                    if isinstance(parent[key], list):
                        parent[key].append(addit)
                    else:
                        parent[key] = [parent[key], addit]
                else:
                    parent[key] = addit
                self.current = parent
                self.key = key

            self.chars = ""
            self.have_chars = False

            if name == self.top:
                self.in_top= False

        def char_data(self, data):
            if self.in_top:
                self.have_chars = True
                self.chars += data

    p = parser(top=top)
    xp = xml.parsers.expat.ParserCreate()

    xp.StartElementHandler = p.start_element
    xp.EndElementHandler = p.end_element
    xp.CharacterDataHandler = p.char_data

    num_set = len([ x for x in (string, filename, file)\
            if x is not None ])

    if num_set != 1:
        raise RuntimeError("Exactly one one of file, filename and string " + \
                "must be set")
    elif filename:
        f = open(filename, "r")
        xp.ParseFile(f)
        f.close()
    elif file:
        xp.ParseFile(file)
    elif string:
        xp.Parse(string, True)
    else:
        return None
    return Topology(**p.current[top])

def topology_from_startsegment(req):
    """
    Generate a topology from a StartSegment request to an access controller.
    This is a little helper to avoid some gross looking syntax.  It accepts
    either a request enclosed in the StartSegmentRequestBody, or one with that
    outer dict removed.
    """

    if 'StartSegmentRequestBody' in req: r = req['StartSegmentRequestBody']
    else: r = req
    
    if 'segmentdescription' in r and \
            'topdldescription' in r['segmentdescription']:
        return Topology(**r['segmentdescription']['topdldescription'])
    else:
        return None

def topology_to_xml(t, top=None):
    """
    Print the topology as XML, recursively using the internal classes to_xml()
    methods.
    """

    if top: return "<%s>%s</%s>" % (top, t.to_xml(), top)
    else: return t.to_xml()

def topology_to_vtopo(t):
    nodes = [ ]
    lans = [ ]

    for eidx, e in enumerate(t.elements):
        if isinstance(e, Computer):
            if e.name: name = e.name
            else: name = "unnamed_node%d" % eidx
            
            ips = [ ]
            for idx, i in enumerate(e.interface):
                ip = i.get_attribute('ip4_address')
                ips.append(ip)
                port = "%s:%d" % (name, idx)
                for idx, s in enumerate(i.subs):
                    bw = 100000
                    delay = 0.0
                    if s.capacity:
                        bw = s.capacity.rate
                    if i.capacity:
                        bw = i.capacity.rate

                    if s.latency:
                        delay = s.latency.time
                    if i.latency:
                        bw = i.latency.time

                    lans.append({
                        'member': port,
                        'vname': s.name,
                        'ip': ip,
                        'vnode': name,
                        'delay': delay,
                        'bandwidth': bw,
                        })
            nodes.append({
                'ips': ":".join(ips),
                'vname': name,
                })

    return { 'node': nodes, 'lan': lans }

def to_tcl_name(n):
    t = re.sub('-(\d+)', '(\\1)', n)
    return t

def generate_portal_command_filter(cmd, add_filter=None, suffix=''):
    def rv(e):
        s =""
        if isinstance(e, Computer):
            gw = e.get_attribute('portal')
            if add_filter and callable(add_filter):
                add = add_filter(e)
            else:
                add = True
            if gw and add:
                s = "%s ${%s} %s\n" % (cmd, to_tcl_name(e.name), suffix)
        return s
    return rv

def generate_portal_image_filter(image):
    def rv(e):
        s =""
        if isinstance(e, Computer):
            gw = e.get_attribute('portal')
            if gw:
                s = "tb-set-node-os ${%s} %s\n" % (to_tcl_name(e.name), image)
        return s
    return rv

def generate_portal_hardware_filter(type):
    def rv(e):
        s =""
        if isinstance(e, Computer):
            gw = e.get_attribute('portal')
            if gw:
                s = "tb-set-hardware ${%s} %s\n" % (to_tcl_name(e.name), type)
        return s
    return rv


def topology_to_ns2(t, filters=[], routing="Manual"):
    out = """
set ns [new Simulator]
source tb_compat.tcl

"""

    for e in t.elements:
        rpms = ""
        tarfiles = ""
        if isinstance(e, Computer):
            name = to_tcl_name(e.name)
            out += "set %s [$ns node]\n" % name
            if e.os and len(e.os) == 1:
                osid = e.os[0].get_attribute('osid')
                if osid:
                    out += "tb-set-node-os ${%s} %s\n" % (name, osid)
            hw = e.get_attribute('type')
            if hw:
                out += "tb-set-hardware ${%s} %s\n" % (name, hw)
            for s in e.software:
                if s.install:
                    tarfiles += "%s %s " % (s.install, s.location)
                else:
                    rpms += "%s " % s.location
            if rpms:
                out += "tb-set-node-rpms ${%s} %s\n" % (name, rpms)
            if tarfiles:
                out += "tb-set-node-tarfiles ${%s} %s\n" % (name, tarfiles)
            startcmd = e.get_attribute('startup')
            if startcmd:
                out+= 'tb-set-node-startcmd ${%s} "%s"\n' % (name, startcmd)
            for f in filters:
                out += f(e)
            out+= "\n"
    
    for idx, s in enumerate(t.substrates):
        if len(s.interfaces) < 2: continue
        loss = s.get_attribute('loss')
        if s.latency: delay = s.latency.time
        else: delay = 0

        if s.capacity: rate = s.capacity.rate
        else: rate = 100000
        name = to_tcl_name(s.name or "sub%d" % idx)

        # Lan
        members = [ to_tcl_name("${%s}") % i.element.name \
                for i in s.interfaces]
        out += 'set %s [$ns make-lan "%s" %fkb %fms ]\n' % \
                (name, " ".join([to_tcl_name(m) for m in members]),
                        rate, 2 * delay)
        if loss:
            "tb-set-lan-loss ${%s} %f\n" % (name, float(loss))

        for i in s.interfaces:
            e = i.element
            ip = i.get_attribute("ip4_address")
            if ip:
                out += "tb-set-ip-lan ${%s} ${%s} %s\n" % \
                        (to_tcl_name(e.name), name, ip)
            if i.capacity :
                out += "tb-set-node-lan-bandwidth ${%s} ${%s} %fkb\n" % \
                        (to_tcl_name(e.name), name, i.capacity.rate)
            if i.latency :
                out += "tb-set-node-lan-delay ${%s} ${%s} %fms\n" % \
                        (to_tcl_name(e.name), name, i.latency.time)
            iloss = i.get_attribute('loss')
            if loss and iloss != loss :
                out += "tb-set-node-lan-loss ${%s} ${%s} %f\n" % \
                        (to_tcl_name(e.name), name, float(loss))
        out+= "\n"
        for f in filters:
            out+= f(s)
    out+="$ns rtproto %s" % routing
    out+="""
$ns run
"""
    return out

def topology_to_rspec(t, filters=[]):
    out = '<?xml version="1.0" encoding="UTF-8"?>\n' + \
        '<rspec xmlns="http://www.protogeni.net/resources/rspec/0.1"\n' + \
        '\txmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"\n' + \
        '\txsi:schemaLocation="http://www.protogeni.net/resources/rspec/0.1 '+ \
        'http://www.protogeni.net/resources/rspec/0.1/request.xsd"\n' + \
        '\ttype="request" >\n'

    ifname = { }
    ifnode = { }

    for e in [e for e in t.elements if isinstance(e, Computer)]:
        name = e.name
        virt_type = e.get_attribute("virtualization_type") or "emulab-vnode"
        exclusive = e.get_attribute("exclusive") or "1"
        hw = e.get_attribute("type") or "pc";
        slots = e.get_attribute("slots") or "1";
        startup = e.get_attribute("startup")

        extras = ""
        if startup: extras += '\t\tstartup_command="%s"\n' % startup
        out += '\t<node virtual_id="%s"\n\t\tvirtualization_type="%s"\n' % \
                (name, virt_type)
        out += '\t\texclusive="%s"' % exclusive
        if extras: out += '\n%s' % extras
        out += '>\n'
        out += '\t\t<node_type type_name="%s" slots="%s"/>\n' % (hw, slots)
        for i, ii in enumerate(e.interface):
            out += '\t\t<interface virtual_id="%s"/>\n' % ii.name
            ifnode[ii] = name
        for f in filters:
            out += f(e)
        out += '\t</node>\n'

    for i, s in enumerate(t.substrates):
        if len(s.interfaces) == 0: 
            continue
        out += '\t<link virtual_id="%s" link_type="ethernet">\n' % s.name
        if s.capacity and s.capacity.kind == "max":
            bwout = True
            out += '\t\t<bandwidth>%d</bandwidth>\n' % s.capacity.rate
        else:
            bwout = False
        if s.latency and s.latency.kind == "max":
            out += '\t\t<latency>%d</latency>\n' % s.latency.time
        elif bwout:
            out += '\t\t<latency>0</latency>\n'
        for ii in s.interfaces:
            out += ('\t\t<interface_ref virtual_node_id="%s" ' + \
                    'virtual_interface_id="%s"/>\n') % (ifnode[ii], ii.name)
        for f in filters:
            out += f(s)
        out += '\t</link>\n'
    out += '</rspec>\n'
    return out